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https://github.com/RGBCube/uutils-coreutils
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Merge pull request #3642 from Garfield96/shuf-find-seps
shuf: improve performance
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commit
7d807f3e73
4 changed files with 37 additions and 17 deletions
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Cargo.lock
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1
Cargo.lock
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@ -2801,6 +2801,7 @@ name = "uu_shuf"
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version = "0.0.14"
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dependencies = [
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"clap 3.1.18",
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"memchr 2.5.0",
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"rand",
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"rand_core",
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"uucore",
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@ -1,26 +1,51 @@
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<!-- spell-checker:ignore tmpfs -->
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# Benchmarking shuf
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`shuf` is a simple utility, but there are at least two important cases
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benchmark: with and without repetition.
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When benchmarking changes, make sure to always build with the `--release` flag.
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You can compare with another branch by compiling on that branch and than
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You can compare with another branch by compiling on that branch and then
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renaming the executable from `shuf` to `shuf.old`.
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## Generate sample data
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Sample input can be generated using `/dev/random`:
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```shell
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wget -O input.txt https://www.gutenberg.org/files/100/100-0.txt
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```
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To avoid distortions from IO, it is recommended to store input data in tmpfs.
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## Without repetition
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By default, `shuf` samples without repetition. To benchmark only the
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randomization and not IO, we can pass the `-i` flag with a range of numbers to
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randomly sample from. An example of a command that works well for testing:
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By default, `shuf` samples without repetition.
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To benchmark only the randomization and not IO, we can pass the `-i` flag with
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a range of numbers to randomly sample from. An example of a command that works
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well for testing:
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```shell
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hyperfine --warmup 10 "target/release/shuf -i 0-10000000"
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```
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To measure the time taken by shuffling an input file, the following command can
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be used::
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```shell
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hyperfine --warmup 10 "target/release/shuf input.txt > /dev/null"
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```
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It is important to discard the output by redirecting it to `/dev/null`, since
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otherwise, a substantial amount of time is added to write the output to the
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filesystem.
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## With repetition
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When repetition is allowed, `shuf` works very differently under the hood, so it
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should be benchmarked separately. In this case we have to pass the `-n` flag or
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should be benchmarked separately. In this case, we have to pass the `-n` flag or
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the command will run forever. An example of a hyperfine command is
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```shell
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@ -16,6 +16,7 @@ path = "src/shuf.rs"
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[dependencies]
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clap = { version = "3.1", features = ["wrap_help", "cargo"] }
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memchr = "2.5.0"
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rand = "0.8"
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rand_core = "0.6"
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uucore = { version=">=0.0.11", package="uucore", path="../../uucore" }
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@ -8,6 +8,7 @@
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// spell-checker:ignore (ToDO) cmdline evec seps rvec fdata
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use clap::{crate_version, Arg, Command, Values};
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use memchr::memchr_iter;
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use rand::prelude::SliceRandom;
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use rand::RngCore;
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use std::fs::File;
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@ -218,20 +219,12 @@ fn find_seps(data: &mut Vec<&[u8]>, sep: u8) {
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if data[i].contains(&sep) {
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let this = data.swap_remove(i);
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let mut p = 0;
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let mut i = 1;
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loop {
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if i == this.len() {
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break;
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}
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if this[i] == sep {
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data.push(&this[p..i]);
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p = i + 1;
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}
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i += 1;
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for i in memchr_iter(sep, this) {
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data.push(&this[p..i]);
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p = i + 1;
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}
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if p < this.len() {
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data.push(&this[p..i]);
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data.push(&this[p..]);
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}
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}
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}
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